http://jenkins-ucsb-1.dataone.org/jenkins/job/d1_annotator/org.dataone$d1_annotator/56/mavenArtifacts/d1_annotator-0.1-SNAPSHOT.pomd1_annotator-0.1-SNAPSHOT.pomorg.dataone/d1_annotator/0.1-SNAPSHOT/d1_annotator-0.1-SNAPSHOT.pomd1_annotator-0.1-SNAPSHOT.ward1_annotator-0.1-SNAPSHOT.warorg.dataone/d1_annotator/0.1-SNAPSHOT/d1_annotator-0.1-SNAPSHOT.warfalse#561200716394d1_annotator » d1_annotator #5656false56-1SUCCESS1476733908271http://jenkins-ucsb-1.dataone.org/jenkins/job/d1_annotator/org.dataone$d1_annotator/56/src/main/java/org/dataone/annotator/matcher/esor/EsorService.java0ad6920dd133f4b0bf96011a99e2b42887270bd91458923941000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduper Jim, remove minScore and numResult parameters for round three ESOR testing. 2016-03-25 09:39:01 -07000ad6920dd133f4b0bf96011a99e2b42887270bd9per Jim, remove minScore and numResult parameters for round three ESOReditsrc/main/java/org/dataone/annotator/matcher/esor/EsorService.javasrc/main/java/org/dataone/annotator/generator/oa/OAAnnotationGenerator.javasrc/main/java/org/dataone/annotator/matcher/esor/EsorService.javasrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javasrc/main/java/org/dataone/annotator/matcher/bioportal/BioPortalService.javasrc/test/java/org/dataone/annotator/matcher/bioportal/BioPortalServiceTest.javasrc/main/java/org/dataone/annotator/generator/AnnotationGenerator.javasrc/main/java/org/dataone/annotator/matcher/ConceptMatcher.javasrc/main/java/org/dataone/annotator/matcher/esor/EsorClient.javasrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.javasrc/main/java/org/dataone/annotator/matcher/orcid/OrcidService.javasrc/main/java/org/dataone/annotator/matcher/ManualConceptMatcher.java3d078a18adbb6cc826c2a01301b97bfcfaac7a661459819063000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduadd context and unit parameters to ESOR concept lookup 2016-04-04 18:17:43 -07003d078a18adbb6cc826c2a01301b97bfcfaac7a66add context and unit parameters to ESOR concept lookupeditsrc/main/java/org/dataone/annotator/generator/AnnotationGenerator.javaeditsrc/main/java/org/dataone/annotator/generator/oa/OAAnnotationGenerator.javaeditsrc/main/java/org/dataone/annotator/matcher/bioportal/BioPortalService.javaeditsrc/main/java/org/dataone/annotator/matcher/esor/EsorService.javaeditsrc/main/java/org/dataone/annotator/matcher/orcid/OrcidService.javaeditsrc/test/java/org/dataone/annotator/matcher/bioportal/BioPortalServiceTest.javaeditsrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.javaeditsrc/main/java/org/dataone/annotator/matcher/ConceptMatcher.javaeditsrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javaeditsrc/main/java/org/dataone/annotator/matcher/ManualConceptMatcher.javaeditsrc/main/java/org/dataone/annotator/matcher/esor/EsorClient.javasrc/main/java/org/dataone/annotator/ontology/MeasurementTypeGenerator.java3e91285a4271b7b63e4b78ba428f78f8fb8f43881459819596000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduwhen label is missing, use the local name of the concept 2016-04-04 18:26:36 -07003e91285a4271b7b63e4b78ba428f78f8fb8f4388when label is missing, use the local name of the concepteditsrc/main/java/org/dataone/annotator/ontology/MeasurementTypeGenerator.javasrc/main/java/org/dataone/annotator/matcher/esor/EsorService.java9864f955142f67431853482bf1eb6f6527f2052a1459878726000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.edusend ESOR parameters via JSON post instead of query string. sort results by score, descending. 2016-04-05 10:52:06 -07009864f955142f67431853482bf1eb6f6527f2052asend ESOR parameters via JSON post instead of query string. sorteditsrc/main/java/org/dataone/annotator/matcher/esor/EsorService.javapom.xmlsrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.java6b1d2065ee910832a0ac552fe1ece65db62b388c1459889269000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduinclude EML abstract text as context when submitting attribute information to ESOR service. 2016-04-05 13:47:49 -07006b1d2065ee910832a0ac552fe1ece65db62b388cinclude EML abstract text as context when submitting attributeeditsrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.javaeditpom.xmlsrc/main/java/org/dataone/annotator/generator/AnnotationGenerator.javasrc/test/java/org/dataone/annotator/ontology/MeasurementTypeGeneratorTest.java57d1a7183aa293116823415a4d2ae87bf0ff348a1466721002000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduuse oboe.1.2 namespace 2016-06-23 15:30:02 -070057d1a7183aa293116823415a4d2ae87bf0ff348ause oboe.1.2 namespaceeditsrc/test/java/org/dataone/annotator/ontology/MeasurementTypeGeneratorTest.javaeditsrc/main/java/org/dataone/annotator/generator/AnnotationGenerator.javasrc/main/resources/org/dataone/configuration/annotator.propertiesae816581dd24f680689606bd2e8dcdcd15aac7fc1473186497000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduadd the d1client connection monitoring property 2016-09-06 11:28:17 -0700ae816581dd24f680689606bd2e8dcdcd15aac7fcadd the d1client connection monitoring propertyeditsrc/main/resources/org/dataone/configuration/annotator.propertiessrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javasrc/test/java/org/dataone/annotator/matcher/bioportal/BioPortalServiceTest.javad301ce3cc22a276e8f57ea9566d1cd006250078d1473188037000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduupdate tests to refelct newer concept matches 2016-09-06 11:53:57 -0700d301ce3cc22a276e8f57ea9566d1cd006250078dupdate tests to refelct newer concept matcheseditsrc/test/java/org/dataone/annotator/matcher/bioportal/BioPortalServiceTest.javaeditsrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javasrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javad572c9e6eb0f7ec900e243822664f49ea920b6371473872742000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduupdate expected concept return from ESOR service 2016-09-14 10:05:42 -0700d572c9e6eb0f7ec900e243822664f49ea920b637update expected concept return from ESOR serviceeditsrc/test/java/org/dataone/annotator/matcher/esor/EsorServiceTest.javasrc/main/resources/org/dataone/configuration/annotator.propertiessrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.javafa84af5c30ed0ae9bae34feabb04445a404f675b1473883795000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduadd handling for new "cosine" service, per-document 2016-09-14 13:09:55 -0700fa84af5c30ed0ae9bae34feabb04445a404f675badd handling for new "cosine" service, per-documenteditsrc/main/resources/org/dataone/configuration/annotator.propertieseditsrc/main/java/org/dataone/annotator/generator/json/JsonAnnotatorGenerator.javasrc/main/java/org/dataone/annotator/matcher/esor/CosineService.javac21320eb7b7c8e24c443f3ce07f10b3b227dee781473883829000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduadd cosine service 2016-09-14 13:10:29 -0700c21320eb7b7c8e24c443f3ce07f10b3b227dee78add cosine serviceaddsrc/main/java/org/dataone/annotator/matcher/esor/CosineService.javasrc/main/java/org/dataone/annotator/store/JsonAnnotatorStore.javasrc/main/java/org/dataone/annotator/store/FileBasedCache.java7034ca89614971710deee937d05c1fcf3efd97a81476733523000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.eduadd file-based caching for annotations - was taking waaaaay too long to look them up from the hosting MN each time they were read. cache will be cleared when the app container (typically tomcat) is restarted. 2016-10-17 12:45:23 -07007034ca89614971710deee937d05c1fcf3efd97a8add file-based caching for annotations - was taking waaaaay too long toeditsrc/main/java/org/dataone/annotator/store/JsonAnnotatorStore.javaaddsrc/main/java/org/dataone/annotator/store/FileBasedCache.javahttp://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderhttp://jenkins-ucsb-1.dataone.org/jenkins/job/d1_annotator/org.dataone$d1_annotator/56/mavenArtifacts/