Started by user administrator Running as SYSTEM Building in workspace /var/lib/jenkins/jobs/metacat_beta/workspace The recommended git tool is: NONE No credentials specified Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/NCEAS/metacat > git init /var/lib/jenkins/jobs/metacat_beta/workspace/metacat # timeout=10 Fetching upstream changes from https://github.com/NCEAS/metacat > git --version # timeout=10 > git --version # 'git version 2.17.1' > git fetch --tags --progress -- https://github.com/NCEAS/metacat +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/NCEAS/metacat # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/refs/tags/2.17.0^{commit} # timeout=10 > git rev-parse refs/tags/2.17.0^{commit} # timeout=10 Checking out Revision 6fb0ba629700907f48b4568ae188cd0aeaeade8e (refs/tags/2.17.0) > git config core.sparsecheckout # timeout=10 > git checkout -f 6fb0ba629700907f48b4568ae188cd0aeaeade8e # timeout=10 Commit message: "Merge pull request #1574 from NCEAS/develop" First time build. Skipping changelog. [metacat] $ ant -file build.xml fullclean Buildfile: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat8/lib/servlet-api.jar build-metacat-common: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.17.0 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-common --- [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.782 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:47:58Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.17.0 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 119 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 0 resource [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 14 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 2 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 7 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-common --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseWriterFactoryTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.737 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseTransformerTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.457 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.EnabledQueryEnginesTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryServiceControllerTest [artifact:mvn] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.185 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.SolrServerFactoryTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.resourcemap.ResourceMapNamespacesTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ metacat-common --- [artifact:mvn] [INFO] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.17.0.jar [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-install-plugin:2.4:install (default-install) @ metacat-common --- [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.17.0.jar to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.17.0/metacat-common-2.17.0.jar [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/pom.xml to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.17.0/metacat-common-2.17.0.pom [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 34.395 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:48:33Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ init: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom [echo] getting to resolve maven dependencies [echo] done with pom [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from central maven repo [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from central maven repo1 [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from sonatype.org [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from Jibx Maven Repository [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Checksum failed on download: local = '7978a39fad59a6ee7d683f4e603055e171208b23'; remote = '<!DOCTYPE' - RETRYING [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Checksum failed on download: local = '7978a39fad59a6ee7d683f4e603055e171208b23'; remote = '<!DOCTYPE' - IGNORING [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from maven2-repository.dev.java.net [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Invalid checksum file - RETRYING [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Invalid checksum file - IGNORING [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom from repository central at http://repo1.maven.org/maven2 [artifact:dependencies] Error transferring file: Server returned HTTP response code: 501 for URL: http://repo1.maven.org/maven2/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom [artifact:dependencies] [WARNING] Unable to get resource 'xerces:xercesImpl:pom:2.12.2' from repository central (http://repo1.maven.org/maven2): Error transferring file: Server returned HTTP response code: 501 for URL: http://repo1.maven.org/maven2/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom from repository dataone.org at http://maven.dataone.org [artifact:dependencies] Unable to locate resource in repository [artifact:dependencies] [INFO] Unable to find resource 'xerces:xercesImpl:pom:2.12.2' in repository dataone.org (http://maven.dataone.org) [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom from repository osgeo at https://repo.osgeo.org/repository/release/ [artifact:dependencies] Unable to locate resource in repository [artifact:dependencies] [INFO] Unable to find resource 'xerces:xercesImpl:pom:2.12.2' in repository osgeo (https://repo.osgeo.org/repository/release/) [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.pom from repository central maven repo at https://repo.maven.apache.org/maven2 [artifact:dependencies] Transferring 3K from central maven repo [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar from repository central at http://repo1.maven.org/maven2 [artifact:dependencies] Error transferring file: Server returned HTTP response code: 501 for URL: http://repo1.maven.org/maven2/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar [artifact:dependencies] [WARNING] Unable to get resource 'xerces:xercesImpl:jar:2.12.2' from repository central (http://repo1.maven.org/maven2): Error transferring file: Server returned HTTP response code: 501 for URL: http://repo1.maven.org/maven2/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar from repository dataone.org at http://maven.dataone.org [artifact:dependencies] Unable to locate resource in repository [artifact:dependencies] [INFO] Unable to find resource 'xerces:xercesImpl:jar:2.12.2' in repository dataone.org (http://maven.dataone.org) [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar from repository osgeo at https://repo.osgeo.org/repository/release/ [artifact:dependencies] Unable to locate resource in repository [artifact:dependencies] [INFO] Unable to find resource 'xerces:xercesImpl:jar:2.12.2' in repository osgeo (https://repo.osgeo.org/repository/release/) [artifact:dependencies] Downloading: xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar from repository central maven repo at https://repo.maven.apache.org/maven2 [artifact:dependencies] Transferring 1412K from central maven repo [echo] done with filesetId [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with resolving maven dependencies clean: fullclean: BUILD SUCCESSFUL Total time: 48 seconds [workspace] $ /bin/sh -xe /tmp/jenkins7953844390371334040.sh [workspace] $ /bin/sh -xe /tmp/jenkins7435904152365473259.sh + cd /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat + export PATH=/usr/share/sphinx/scripts/python3/:/usr/share/sphinx/scripts/python3/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/local/bin + make clean html rm -rf ../../../build/docs/* `which sphinx-build` -b html -d ../../../build/docs/doctrees source ../../../build/docs Running Sphinx v1.6.7 making output directory... loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [html]: targets for 24 source files that are out of date updating environment: 24 added, 0 changed, 0 removed reading sources... [ 4%] authinterface reading sources... [ 8%] configuration reading sources... [ 12%] contributors reading sources... [ 16%] dataone reading sources... [ 20%] development reading sources... [ 25%] doi reading sources... [ 29%] event-logging reading sources... [ 33%] geoserver reading sources... [ 37%] harvester reading sources... [ 41%] identifiers reading sources... [ 45%] index reading sources... [ 50%] install reading sources... [ 54%] intro reading sources... [ 58%] license reading sources... [ 62%] metacat-properties reading sources... [ 66%] oaipmh reading sources... [ 70%] ore-model-expansion reading sources... [ 75%] query-index reading sources... [ 79%] readonly reading sources... [ 83%] replication reading sources... [ 87%] sitemaps reading sources... [ 91%] statistics-service reading sources... [ 95%] submitting reading sources... [100%] themes /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:90: WARNING: Title underline too short. Download the Metacat Installer (Highly Recommended) .............................. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:139: WARNING: Title underline too short. Check Out Metacat Source Code from GitHub (for Developers) ....................................................... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:139: WARNING: Title underline too short. Check Out Metacat Source Code from GitHub (for Developers) ....................................................... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:480: WARNING: Inline emphasis start-string without end-string. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/metacat-properties.rst:181: WARNING: malformed hyperlink target. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/metacat-properties.rst:548: WARNING: Block quote ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/ore-model-expansion.rst:200: WARNING: Literal block expected; none found. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/ore-model-expansion.rst:233: WARNING: Literal block expected; none found. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:44: WARNING: Bullet list ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:45: WARNING: Line block ends without a blank line. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:55: WARNING: Bullet list ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:56: WARNING: Line block ends without a blank line. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/sitemaps.rst:69: WARNING: Title underline too short. Serving Your Sitemaps ------------------ /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/sitemaps.rst:69: WARNING: Title underline too short. Serving Your Sitemaps ------------------ /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/themes.rst:69: WARNING: Enumerated list ends without a blank line; unexpected unindent. looking for now-outdated files... none found pickling environment... done checking consistency... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 4%] authinterface writing output... [ 8%] configuration writing output... [ 12%] contributors writing output... [ 16%] dataone writing output... [ 20%] development writing output... [ 25%] doi writing output... [ 29%] event-logging writing output... [ 33%] geoserver writing output... [ 37%] harvester writing output... [ 41%] identifiers writing output... [ 45%] index writing output... [ 50%] install writing output... [ 54%] intro writing output... [ 58%] license writing output... [ 62%] metacat-properties writing output... [ 66%] oaipmh writing output... [ 70%] ore-model-expansion writing output... [ 75%] query-index writing output... [ 79%] readonly writing output... [ 83%] replication writing output... [ 87%] sitemaps writing output... [ 91%] statistics-service writing output... [ 95%] submitting writing output... [100%] themes generating indices... genindex writing additional pages... search copying images... [ 2%] images/screenshots/image011.png copying images... [ 4%] images/screenshots/image071.png copying images... [ 6%] images/screenshots/image009.png copying images... [ 8%] images/screenshots/image015.png copying images... [ 10%] images/screenshots/image017.png copying images... [ 12%] images/screenshots/image019.png copying images... 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[ 48%] images/identifiers.png copying images... [ 50%] images/guid_read.png copying images... [ 52%] images/guid_insert.png copying images... [ 54%] images/guid_update.png copying images... [ 56%] images/guid_delete.png copying images... [ 58%] themes/metacatui/static/metacat-logo-darkgray.png copying images... [ 60%] images/screenshots/image007.png copying images... [ 62%] images/PROV-simple-diagram.png copying images... [ 64%] images/Derived-data-packages-model.png copying images... [ 66%] images/derived-data-smith-package.png copying images... [ 68%] images/Derived-data-example.png copying images... [ 70%] images/PROV-simple-diagram-without-activity.png copying images... [ 72%] images/derived-data-smith-package-with-img.png copying images... [ 74%] images/indexing-class-diagram.png copying images... [ 76%] images/screenshots/image059.jpg copying images... [ 78%] images/screenshots/image061.jpg copying images... [ 80%] images/screenshots/image063.jpg copying images... 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[metacat] $ ant -file build.xml -Dbuild.tomcat.dir=/usr/share/tomcat7 -Dmetacat.dir=/var/lib/jenkins/jobs/metacat_beta/workspace/metacat javadoc fulldist Buildfile: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat7/lib/servlet-api.jar build-metacat-common: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.17.0 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-common --- [artifact:mvn] [INFO] Deleting /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.214 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:48:57Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.17.0 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 119 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 0 resource [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 14 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 2 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 7 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-common --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseWriterFactoryTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.627 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseTransformerTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.812 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.EnabledQueryEnginesTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryServiceControllerTest [artifact:mvn] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.155 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.SolrServerFactoryTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.resourcemap.ResourceMapNamespacesTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ metacat-common --- [artifact:mvn] [INFO] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.17.0.jar [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-install-plugin:2.4:install (default-install) @ metacat-common --- [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.17.0.jar to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.17.0/metacat-common-2.17.0.jar [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/pom.xml to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.17.0/metacat-common-2.17.0.pom [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 6.981 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:49:05Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ init: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom [echo] getting to resolve maven dependencies [echo] done with pom [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with filesetId [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with resolving maven dependencies resolveDependencies: [echo] Moving Maven dependencies (${dependency.fileset}) to lib/maven [delete] Deleting directory /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven [copy] Copying 316 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven prepare: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/tmp [copy] Copying 534 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src javadoc: [javadoc] Generating Javadoc [javadoc] Javadoc execution [javadoc] Loading source files for package edu.ucsb.nceas.dbadapter... [javadoc] Loading source files for package edu.ucsb.nceas.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.accesscontrol... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.solr... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.advancedsearch... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.annotation... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.authentication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.cart... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client.rest... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.clientview... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.database... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.convert... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.hazelcast... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.quota... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.resourcemap... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataquery... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.datacite... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.ezid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.osti... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.download... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.event... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.harvesterClient... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.index... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.lsid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.harvester... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.catalog... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.crosswalk... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.object.handler... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.plugin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.properties... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.replication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.multipart... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v2... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.service... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.shared... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.spatial... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.util... [javadoc] Loading source files for package edu.ucsb.nceas.protocols.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.shared.xsd... [javadoc] Constructing Javadoc information... [javadoc] javadoc: warning - Multiple sources of package comments found for package "javax.servlet" [javadoc] javadoc: warning - Multiple sources of package comments found for package "javax.servlet.http" [javadoc] Standard Doclet version 1.8.0_312 [javadoc] Building tree for all the packages and classes... [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/AbstractDatabase.java:158: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "58" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see: reference not found: http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AccessionNumber.java:76: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AssociateAccessPolicy.java:140: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:60: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @param argument "user" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @param argument "authuser" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:130: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:567: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:675: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:779: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:848: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:863: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1109: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1125: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthSession.java:230: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:71: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:82: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:118: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:134: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:147: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:166: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:178: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:98: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:115: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:132: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:151: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:167: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:180: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:206: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:218: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/CommentNode.java:45: warning - @param argument "nodetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:478: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:497: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:1531: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:243: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:144: warning - @param argument "xmlfile" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:316: warning - @param argument "resoponse" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:478: warning - @param argument "sessionid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:497: warning - @param argument "useXMLIndex" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "docId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "out," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "user," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "groups," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:783: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:218: warning - @param argument "revision," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:74: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:100: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:119: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:59: warning - @param argument "query" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:93: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:127: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:93: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "sourcetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "targettype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "params" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:448: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:73: warning - @param argument "-dt" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:611: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:696: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:850: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:871: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:925: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:234: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:234: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:271: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "rootnodeid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "docname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "doctype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "version," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:381: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:381: warning - @param argument "groupnames" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:464: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "input," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "docHomeServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "notificationServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "accnum," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "action," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "serverCode," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1082: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1123: warning - @param argument "pw" is not a parameter name. [javadoc] Building index for all the packages and classes... [javadoc] Building index for all classes... [javadoc] Generating /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api/help-doc.html... [javadoc] 100 warnings cgiPrepare: [exec] make: *** No rule to make target 'clean'. Stop. [exec] Result: 2 [exec] Checking if your kit is complete... [exec] Looks good [exec] Generating a Unix-style Makefile [exec] Writing Makefile for Metacat [exec] Writing MYMETA.yml and MYMETA.json [exec] cp Metacat.pm blib/lib/Metacat.pm [exec] AutoSplitting blib/lib/Metacat.pm (blib/lib/auto/Metacat) [exec] Manifying 1 pod document setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat7/lib/servlet-api.jar build-metacat-common: init: resolveDependencies: [echo] Moving Maven dependencies (${dependency.fileset}) to lib/maven [delete] Deleting directory /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven [copy] Copying 316 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven prepare: compile: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:582: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 355 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [javac] warning: Implicitly compiled files were not subject to annotation processing. [javac] Use -proc:none to disable annotation processing or -implicit to specify a policy for implicit compilation. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning giteml: [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_BETA_4'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_BETA_4'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 746fbd1b This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_BETA_4'. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_BETA_4 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_BRANCH_EML_2_0_0_BETA_6_FOR_METACAT'... [echo] git checkout [exec] Branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' set up to track remote branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' from 'origin'. [exec] Switched to a new branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * branch BRANCH_EML_2_0_0_BETA_6_FOR_METACAT -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_0_0_UPDATE_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_0_0_UPDATE_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at aefd2957 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_0_0_UPDATE_1'. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_0_0_UPDATE_1 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_0_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_0_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 95efe894 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_0_1'. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_0_1 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_1_0'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_1_0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at ecd6ed31 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_1_0'. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_1_0 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_1_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_1_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at e80ac911 creating tag for EML 2.1.1 [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_1_1 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_UTILS_1_1_2'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_UTILS_1_1_2'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 9543fcf2 Tag for EML stylesheets for Metacat 2.5.0 release [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_UTILS_1_1_2 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_2_0'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_2_0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 233427f0 Update release target to include generated site. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_2_0 -> FETCH_HEAD getemlpre2: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd [copy] Copying 13 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd [copy] Copying 17 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common getemlpre2beta4: [copy] Copying 14 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd geteml2+: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.0 [copy] Copying 24 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.0 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.1 [copy] Copying 24 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.1 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.0 [copy] Copying 25 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.0 Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom copyxsl: [copy] Copying 28 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/eml-2 [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.1 [copy] Copying 25 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.1 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.2.0 [copy] Copying 27 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.2.0 getConversionXSL: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/emlb6toeml2 [copy] Copying 7 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/emlb6toeml2 geteml: jar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/metacat.jar client: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:610: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds clientjar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/metacat-client.jar harvester: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:636: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 11 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. harvesterjar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/harvester.jar testPrepare: [echo] in testPrepare [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/test [copy] Copying 6 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/test javadoc: [javadoc] Generating Javadoc [javadoc] Javadoc execution [javadoc] Loading source files for package edu.ucsb.nceas.dbadapter... [javadoc] Loading source files for package edu.ucsb.nceas.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.accesscontrol... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.solr... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.advancedsearch... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.annotation... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.authentication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.cart... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client.rest... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.clientview... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.database... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.convert... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.hazelcast... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.quota... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.resourcemap... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataquery... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.datacite... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.ezid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.osti... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.download... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.event... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.harvesterClient... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.index... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.lsid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.harvester... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.catalog... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.crosswalk... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.object.handler... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.plugin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.properties... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.replication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice... 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[javadoc] javadoc: warning - Multiple sources of package comments found for package "javax.servlet" [javadoc] javadoc: warning - Multiple sources of package comments found for package "javax.servlet.http" [javadoc] Standard Doclet version 1.8.0_312 [javadoc] Building tree for all the packages and classes... [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/AbstractDatabase.java:158: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "58" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see: reference not found: http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AccessionNumber.java:76: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AssociateAccessPolicy.java:140: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:60: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @param argument "user" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @param argument "authuser" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:130: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:567: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:675: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:779: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:848: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:863: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1109: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1125: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthSession.java:230: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:71: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:82: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:118: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:134: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:147: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:166: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:178: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:98: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:115: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:132: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:151: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:167: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:180: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:206: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:218: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/CommentNode.java:45: warning - @param argument "nodetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:478: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:497: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:1531: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:243: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:144: warning - @param argument "xmlfile" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:316: warning - @param argument "resoponse" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:478: warning - @param argument "sessionid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:497: warning - @param argument "useXMLIndex" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "docId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "out," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "user," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2434: warning - @param argument "groups," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:783: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:218: warning - @param argument "revision," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:74: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:100: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:119: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:59: warning - @param argument "query" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:93: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:127: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:93: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "sourcetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "targettype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:152: warning - @param argument "params" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:448: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:73: warning - @param argument "-dt" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:611: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:696: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:850: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:871: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:925: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:234: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:234: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:271: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "rootnodeid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "docname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "doctype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:315: warning - @param argument "version," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:381: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:381: warning - @param argument "groupnames" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:464: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "input," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "docHomeServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:631: warning - @param argument "notificationServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "accnum," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "action," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:808: warning - @param argument "serverCode," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1082: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1123: warning - @param argument "pw" is not a parameter name. [javadoc] Building index for all the packages and classes... [javadoc] Building index for all classes... [javadoc] Generating /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api/help-doc.html... [javadoc] 100 warnings admindoc: [exec] GRAPHVIZ_DOT=`which dot` `which java` -jar "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/../../tools/plantuml.jar" -config "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/../../tools/plantuml.conf" "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/*.rst" [exec] `which sphinx-build` -b html -d ../../../build/docs/doctrees source ../../../build/docs [exec] Running Sphinx v1.6.7 [exec] loading pickled environment... done [exec] building [mo]: targets for 0 po files that are out of date [exec] building [html]: targets for 0 source files that are out of date [exec] updating environment: 0 added, 3 changed, 0 removed [exec] reading sources... [ 33%] identifiers [exec] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst: WARNING: document isn't included in any toctree [exec] reading sources... [ 66%] query-index [exec] reading sources... [100%] statistics-service [exec] [exec] looking for now-outdated files... none found [exec] pickling environment... done [exec] checking consistency... done [exec] preparing documents... done [exec] writing output... [ 20%] development [exec] writing output... [ 40%] identifiers [exec] writing output... [ 60%] index [exec] writing output... [ 80%] query-index [exec] writing output... [100%] statistics-service [exec] [exec] generating indices... genindex [exec] writing additional pages... search [exec] copying images... [ 12%] images/identifiers.png [exec] copying images... [ 25%] images/guid_read.png [exec] copying images... [ 37%] images/guid_insert.png [exec] copying images... [ 50%] images/guid_update.png [exec] copying images... [ 62%] images/guid_delete.png [exec] copying images... [ 75%] themes/metacatui/static/metacat-logo-darkgray.png [exec] copying images... [ 87%] images/indexing-class-diagram.png [exec] copying images... [100%] images/stats-query-sequence-diagram.png [exec] [exec] copying downloadable files... [100%] _static/resourceMap_couture.1.1.rdf [exec] [exec] copying static files... done [exec] copying extra files... done [exec] dumping search index in English (code: en) ... done [exec] dumping object inventory... done [exec] build succeeded, 1 warning. [exec] [exec] Build finished. The HTML pages are in ../../../build/docs. documentation: warPrepare: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/classes [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/sql [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/docs [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/temp [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/style/common/templates [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 320 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 115 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/classes [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/classes [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 363 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat [copy] Copying 1545 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat [copy] Copying 1038 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/docs [copy] Copying 159 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/sql [copy] Copying 47 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/scripts [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/scripts [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 7 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/temp war: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist [war] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat.war build-metacat-index: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] -------------< edu.ucsb.nceas.metacat.index:metacat-index >------------- [artifact:mvn] [INFO] Building metacat-index 2.17.0 [artifact:mvn] [INFO] --------------------------------[ war ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-index --- [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.341 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:51:26Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] -------------< edu.ucsb.nceas.metacat.index:metacat-index >------------- [artifact:mvn] [INFO] Building metacat-index 2.17.0 [artifact:mvn] [INFO] --------------------------------[ war ]--------------------------------- [artifact:mvn] [INFO] Downloading from central maven repo: https://repo.maven.apache.org/maven2/com/googlecode/foresite-toolkit/foresite/1.0-SNAPSHOT/maven-metadata.xml [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 119 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources-2) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 115 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-index --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 49 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 19 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-index --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 55 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 11 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-index --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest [artifact:mvn] metacat-index 20220408-22:51:41: [ERROR]: Problem loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_cn_index_processor/2.3.14/d1_cn_index_processor-2.3.14.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings:getConfiguration:109] [artifact:mvn] org.apache.commons.configuration.ConfigurationException: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:849) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.initCombinedConfiguration(DefaultConfigurationBuilder.java:699) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:601) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:566) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.dataone.configuration.Settings.getConfiguration(Settings.java:106) [d1_common_java-2.3.0.jar:?] [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<init>(PerformanceLogger.java:18) [d1_cn_index_common-2.3.2.jar:?] [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<clinit>(PerformanceLogger.java:11) [d1_cn_index_common-2.3.2.jar:?] [artifact:mvn] at org.dataone.cn.indexer.parser.BaseXPathDocumentSubprocessor.<init>(BaseXPathDocumentSubprocessor.java:66) [d1_cn_index_processor-2.3.14.jar:?] [artifact:mvn] at org.dataone.cn.indexer.parser.ScienceMetadataDocumentSubprocessor.<init>(ScienceMetadataDocumentSubprocessor.java:36) [d1_cn_index_processor-2.3.14.jar:?] [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) [?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) [?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Constructor.newInstance(Constructor.java:423) [?:1.8.0_312] [artifact:mvn] at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:87) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:990) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:943) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:607) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:925) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:83) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.getContext(ApplicationController.java:231) [classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.initialize(ApplicationController.java:201) [classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.SolrIndexIT.generateSolrIndex(SolrIndexIT.java:58) [test-classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest.getMetacatRdfXmlSubprocessor(MetacatRdfXmlSubprocessorTest.java:103) [test-classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest.testProcessDocument(MetacatRdfXmlSubprocessorTest.java:43) [test-classes/:?] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_312] [artifact:mvn] at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.run(ParentRunner.java:413) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_312] [artifact:mvn] at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) [surefire-api-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:335) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] ... 64 more [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:249) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:229) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$FileConfigurationProvider.getConfiguration(DefaultConfigurationBuilder.java:1419) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$ConfigurationBeanFactory.createBean(DefaultConfigurationBuilder.java:1308) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:330) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] ... 64 more [artifact:mvn] metacat-index 20220408-22:51:41: [ERROR]: Problem loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_cn_index_generator/2.3.3/d1_cn_index_generator-2.3.3.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings:getConfiguration:109] [artifact:mvn] org.apache.commons.configuration.ConfigurationException: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:849) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.initCombinedConfiguration(DefaultConfigurationBuilder.java:699) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:601) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:566) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.dataone.configuration.Settings.getConfiguration(Settings.java:106) [d1_common_java-2.3.0.jar:?] [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<init>(PerformanceLogger.java:18) [d1_cn_index_common-2.3.2.jar:?] [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<clinit>(PerformanceLogger.java:11) [d1_cn_index_common-2.3.2.jar:?] [artifact:mvn] at org.dataone.cn.indexer.parser.BaseXPathDocumentSubprocessor.<init>(BaseXPathDocumentSubprocessor.java:66) [d1_cn_index_processor-2.3.14.jar:?] [artifact:mvn] at org.dataone.cn.indexer.parser.ScienceMetadataDocumentSubprocessor.<init>(ScienceMetadataDocumentSubprocessor.java:36) [d1_cn_index_processor-2.3.14.jar:?] [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) [?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) [?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Constructor.newInstance(Constructor.java:423) [?:1.8.0_312] [artifact:mvn] at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:87) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:990) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:943) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:607) [spring-beans-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:925) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:83) [spring-context-3.1.4.RELEASE.jar:3.1.4.RELEASE] [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.getContext(ApplicationController.java:231) [classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.initialize(ApplicationController.java:201) [classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.SolrIndexIT.generateSolrIndex(SolrIndexIT.java:58) [test-classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest.getMetacatRdfXmlSubprocessor(MetacatRdfXmlSubprocessorTest.java:103) [test-classes/:?] [artifact:mvn] at edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest.testProcessDocument(MetacatRdfXmlSubprocessorTest.java:43) [test-classes/:?] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_312] [artifact:mvn] at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.junit.runners.ParentRunner.run(ParentRunner.java:413) [junit-4.13.1.jar:4.13.1] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) [surefire-junit4-2.12.4.jar:2.12.4] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_312] [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_312] [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_312] [artifact:mvn] at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) [surefire-api-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) [surefire-booter-2.12.4.jar:2.12.4] [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:335) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] ... 64 more [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:249) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:229) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$FileConfigurationProvider.getConfiguration(DefaultConfigurationBuilder.java:1419) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$ConfigurationBeanFactory.createBean(DefaultConfigurationBuilder.java:1308) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:330) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) ~[commons-configuration-1.7.jar:1.7] [artifact:mvn] ... 64 more [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field><field name="prov_wasDerivedFrom">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_generatedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_generatedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_wasDerivedFrom">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_wasDerivedFrom">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_wasDerivedFrom">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_wasDerivedFrom">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_generatedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_generatedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_usedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_usedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_used">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_used">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_used">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_used">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_generated">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_wasExecutedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Program</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_used">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_generated">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field><field name="prov_generated">urn:uuid:a0e104da-c925-4765-af60-29310de1b99a</field><field name="prov_wasExecutedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Program</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">resourceMap_urn:uuid:04780847-6082-455b-9831-22269c9ec0a6</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Execution</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:e029b6e4-be07-442b-a54e-2d0aca657294</field><field name="prov_instanceOfClass">http://www.openarchives.org/ore/terms/ResourceMap</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:a0e104da-c925-4765-af60-29310de1b99a</field><field name="prov_generatedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_generatedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Execution</field></doc> [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.181 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.EmlAnnotationSubprocessorTest [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">eml-annotation-scimeta</field><field name="sem_annotation">http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#MeasurementType</field><field name="sem_annotation">http://purl.obolibrary.org/obo/RO_0002352</field><field name="sem_annotation">http://purl.obolibrary.org/obo/RO_0000056</field><field name="sem_annotation">http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#containsMeasurementsOfType</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000536</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000514</field><field name="sem_annotation">http://purl.obolibrary.org/obo/RO_0002328</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000513</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001105</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000531</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001143</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001242</field><field name="sem_annotation">http://www.w3.org/2000/01/rdf-schema#Resource</field><field name="sem_annotation">http://www.w3.org/1999/02/22-rdf-syntax-ns#type</field></doc> [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.409 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.OntologyModelServiceTest [artifact:mvn] FOOBAR: edu.ucsb.nceas.metacat.index.annotation.OntologyModelService [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.PortalSubprocessorTest [artifact:mvn] Processing documment: src/test/resources/collection/portal-1.1.0-example.xml [artifact:mvn] correct collectionQuery: ((text:"*soil carbon*" AND (keywords:"soil layer" OR attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND (-(datasource:urn\:node\:TERN OR datasource:urn\:node\:ARCTIC) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((text:"*soil carbon*" AND (keywords:"soil layer" OR attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND (-(datasource:urn\:node\:TERN OR datasource:urn\:node\:ARCTIC) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/collection-1.1.0-example-filterGroup.xml [artifact:mvn] correct collectionQuery: ((text:*soil* AND (keywords:"soil layer" AND attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND (-(datasource:urn\:node\:KNB OR (authorLastName:Smith AND authorGivenNameSort:Bob)) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((text:*soil* AND (keywords:"soil layer" AND attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND (-(datasource:urn\:node\:KNB OR (authorLastName:Smith AND authorGivenNameSort:Bob)) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/collection-1.1.0-example2-filterGroup.xml [artifact:mvn] correct collectionQuery: ((siteText:*America* AND keywordsText:ant AND (-(northBoundCoord:[* TO 54] AND eastBoundCoord:[* TO -62] AND southBoundCoord:[* TO 44] AND westBoundCoord:[* TO -79]) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((siteText:*America* AND keywordsText:ant AND (-(northBoundCoord:[* TO 54] AND eastBoundCoord:[* TO -62] AND southBoundCoord:[* TO 44] AND westBoundCoord:[* TO -79]) AND *:* ))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/collection-1.1.0-example-filterGroup-operator.xml [artifact:mvn] correct collectionQuery: (((((projectText:"My Project" AND keywordsText:"Special Word") OR (awardNumber:123 AND (beginDate:[2013-01-01T00:00:00Z TO 2020-12-31T23:59:59Z] OR endDate:[2013-01-01T00:00:00Z TO 2020-12-31T23:59:59Z])))) OR (((authorLastName:Kim)) OR (-((identifier:urn\:uuid\:a843239b-6d04-4019-9835-6e3c8e3418c8 OR identifier:urn\:uuid\:30a28104-6814-497a-8f72-7fecb36cb721 OR identifier:urn\:uuid\:83b718dd-d709-466e-bf0d-0710a71e7a20)) AND *:* )))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: (((((projectText:"My Project" AND keywordsText:"Special Word") OR (awardNumber:123 AND (beginDate:[2013-01-01T00:00:00Z TO 2020-12-31T23:59:59Z] OR endDate:[2013-01-01T00:00:00Z TO 2020-12-31T23:59:59Z])))) OR (((authorLastName:Kim)) OR (-((identifier:urn\:uuid\:a843239b-6d04-4019-9835-6e3c8e3418c8 OR identifier:urn\:uuid\:30a28104-6814-497a-8f72-7fecb36cb721 OR identifier:urn\:uuid\:83b718dd-d709-466e-bf0d-0710a71e7a20)) AND *:* )))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/collection-1.1.0-example-fieldsOperator.xml [artifact:mvn] correct collectionQuery: (((title:salmon AND title:climate) OR (abstract:salmon AND abstract:climate) OR (keywordsText:salmon AND keywordsText:climate))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: (((title:salmon AND title:climate) OR (abstract:salmon AND abstract:climate) OR (keywordsText:salmon AND keywordsText:climate))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-1.1.0-example-negation-only.xml [artifact:mvn] correct collectionQuery: ((-(abstract:*fish*) AND *:* )) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((-(abstract:*fish*) AND *:* )) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/collection-example.xml [artifact:mvn] correct collectionQuery: ((text:*soil* AND (keywords:soil OR attribute:soil) AND (dateUploaded:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *])) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((text:*soil* AND (keywords:soil OR attribute:soil) AND (dateUploaded:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *])) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-simple.xml [artifact:mvn] correct collectionQuery: ((text:*soil* AND (keywords:"soil layer" OR attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *])) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((text:*soil* AND (keywords:"soil layer" OR attribute:"soil layer") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-01-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *])) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-full.xml [artifact:mvn] correct collectionQuery: ((((text:soil AND (-(keywords:"*soil carbon*" OR attribute:"*soil carbon*") AND *:* ) AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND southBoundCoord:[1.03 TO 141.78] AND northBoundCoord:5)) OR seriesId:urn\:uuid\:4297479f-edf6-4740-aaaa-f1291e3c2e86 OR (id:urn\:uuid\:55be0c0e-c77a-4971-9ea7-16acc65d5f04 OR id:urn\:uuid\:23242117-0024-4028-9064-0abbbf4fa4e6)) OR isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((((text:soil AND (-(keywords:"*soil carbon*" OR attribute:"*soil carbon*") AND *:* ) AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z] OR beginDate:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND southBoundCoord:[1.03 TO 141.78] AND northBoundCoord:5)) OR seriesId:urn\:uuid\:4297479f-edf6-4740-aaaa-f1291e3c2e86 OR (id:urn\:uuid\:55be0c0e-c77a-4971-9ea7-16acc65d5f04 OR id:urn\:uuid\:23242117-0024-4028-9064-0abbbf4fa4e6)) OR isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-seriesId.xml [artifact:mvn] correct collectionQuery: (seriesId:urn\:uuid\:1234) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: (seriesId:urn\:uuid\:1234) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-sasap.xml [artifact:mvn] correct collectionQuery: ((text:*test* AND (datePublished:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z] OR dateUploaded:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z]) AND documents:*) OR isPartOf:urn\:uuid\:7c959e15-d309-4850-91e8-399c0e862893) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((text:*test* AND (datePublished:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z] OR dateUploaded:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z]) AND documents:*) OR isPartOf:urn\:uuid\:7c959e15-d309-4850-91e8-399c0e862893) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-multiple-pids.xml [artifact:mvn] correct collectionQuery: ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2) OR isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2) OR isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-only-pids.xml [artifact:mvn] correct collectionQuery: ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2)) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2)) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-multiple-fields-values.xml [artifact:mvn] correct collectionQuery: ((((((keywords:soil AND keywords:carbon) OR (attribute:soil AND attribute:carbon)))) OR (id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((((((keywords:soil AND keywords:carbon) OR (attribute:soil AND attribute:carbon)))) OR (id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/example-portal-A.xml [artifact:mvn] correct collectionQuery: ((-((text:atlantic OR text:pacific)) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((-((text:atlantic OR text:pacific)) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/example-portal-B.xml [artifact:mvn] correct collectionQuery: ((-((-(kingdom:Animalia) AND *:* )) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((-((-(kingdom:Animalia) AND *:* )) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/example-portal-C.xml [artifact:mvn] correct collectionQuery: ((((keywordsText:polar)) OR id:urn\:uuid\:4852b15a-9c05-480b-b91d-fa34a59ce073 OR identifier:urn\:uuid\:aa80a1a5-b1bc-4788-9ca6-76c77247593b OR seriesId:S1_201628322590140) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((((keywordsText:polar)) OR id:urn\:uuid\:4852b15a-9c05-480b-b91d-fa34a59ce073 OR identifier:urn\:uuid\:aa80a1a5-b1bc-4788-9ca6-76c77247593b OR seriesId:S1_201628322590140) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/example-portal-D.xml [artifact:mvn] correct collectionQuery: ((-(((keywordsText:polar AND title:*remote*)) OR id:urn\:uuid\:4852b15a-9c05-480b-b91d-fa34a59ce073 OR identifier:urn\:uuid\:aa80a1a5-b1bc-4788-9ca6-76c77247593b OR seriesId:S1_201628322590140) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: ((-(((keywordsText:polar AND title:*remote*)) OR id:urn\:uuid\:4852b15a-9c05-480b-b91d-fa34a59ce073 OR identifier:urn\:uuid\:aa80a1a5-b1bc-4788-9ca6-76c77247593b OR seriesId:S1_201628322590140) AND *:* ) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/example-portal-E.xml [artifact:mvn] correct collectionQuery: (((((((title:*flower* OR title:*leaf*) OR (abstract:*flower* OR abstract:*leaf*)) AND datePublished:[2018-01-01T00:00:00Z TO *]) AND (-(keywordsText:vegetation OR authorGivenNameSort:William) AND *:* ) AND (documents:* OR (-(projectText:*) AND *:* )))) OR (identifier:urn\:uuid\:1dbd8284-b388-4268-8bde-f53dca8710b2 OR identifier:urn\:uuid\:e68d6da6-9f68-42fd-8c85-5fbaa7325569 OR identifier:urn\:uuid\:71bad44a-0d9f-45fe-8966-ec63dd2f3357 OR identifier:urn\:uuid\:baa20036-dcc8-4828-95f9-bda380f7fc28)) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: (((((((title:*flower* OR title:*leaf*) OR (abstract:*flower* OR abstract:*leaf*)) AND datePublished:[2018-01-01T00:00:00Z TO *]) AND (-(keywordsText:vegetation OR authorGivenNameSort:William) AND *:* ) AND (documents:* OR (-(projectText:*) AND *:* )))) OR (identifier:urn\:uuid\:1dbd8284-b388-4268-8bde-f53dca8710b2 OR identifier:urn\:uuid\:e68d6da6-9f68-42fd-8c85-5fbaa7325569 OR identifier:urn\:uuid\:71bad44a-0d9f-45fe-8966-ec63dd2f3357 OR identifier:urn\:uuid\:baa20036-dcc8-4828-95f9-bda380f7fc28)) OR isPartOf:urn\:uuid\:1a0fc71f-2d4b-404b-9cf5-aa82db18479c) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-multiple-fields-or-operator.xml [artifact:mvn] correct collectionQuery: (((abstract:*carbon* AND abstract:*organic*) AND keywordsText:*soil* AND (-((keywordsText:oceans OR keywordsText:arctic)) AND *:* ) AND (abstract:*arctic* OR title:*arctic* OR readPermission:*arctic*))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] actual collectionQuery: (((abstract:*carbon* AND abstract:*organic*) AND keywordsText:*soil* AND (-((keywordsText:oceans OR keywordsText:arctic)) AND *:* ) AND (abstract:*arctic* OR title:*arctic* OR readPermission:*arctic*))) AND (-obsoletedBy:* AND formatType:METADATA) [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.688 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-war-plugin:2.6:war (default-war) @ metacat-index --- [artifact:mvn] [INFO] Packaging webapp [artifact:mvn] [INFO] Assembling webapp [metacat-index] in [/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/metacat-index-2.17.0] [artifact:mvn] [INFO] Processing war project [artifact:mvn] [INFO] Copying webapp resources [/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/src/main/webapp] [artifact:mvn] [INFO] Webapp assembled in [709 msecs] [artifact:mvn] [INFO] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/metacat-index-2.17.0.war [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 39.587 s [artifact:mvn] [INFO] Finished at: 2022-04-08T22:52:07Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ dist-metacat-index: [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist getMetacatUI: [echo] git clone [exec] Cloning into 'build/metacatui_build'... [echo] git checkout [exec] Note: checking out '2.19.0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at cf2cfed39 Merge branch 'develop' into main [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/metacatui [exec] * tag 2.19.0 -> FETCH_HEAD build-metacat-ui: [war] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacatui.war build-metacat: distbin: [copy] Copying 47 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist [zip] Building zip: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.17.0.zip [tar] Building tar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.17.0.tar [gzip] Building: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.17.0.tar.gz [delete] Deleting: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.17.0.tar protocol: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/protocol.jar dist: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0 [copy] Copying 3659 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0 [copy] Copied 407 empty directories to 16 empty directories under /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0 [copy] Copying 112 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/docs [copy] Copied 26 empty directories to 3 empty directories under /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/docs [copy] Copying 102 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/docs [copy] Copying 1037 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/docs/dev [copy] Copying 534 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/src [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/tests/servertestfiles [copy] Copying 6 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/test/servertestfiles distsrc: [copy] Copying 188 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.17.0/src [zip] Building zip: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-src-2.17.0.zip [tar] Building tar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-src-2.17.0.tar [tar] Entry: metacat-2.17.0/metacat-index/target/metacat-index-2.17.0/WEB-INF/classes/edu/ucsb/nceas/metacat/index/ longer than 100 characters. 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