Started by an SCM change Building in workspace /var/lib/jenkins/jobs/d1_cn_common/workspace Cleaning local Directory d1_cn_common Checking out https://repository.dataone.org/software/cicore/trunk/cn/d1_cn_common at revision '2018-09-06T17:17:35.106 +0000' A pom.xml A dependency.tree A src A src/test A src/test/resources A src/test/resources/org A src/test/resources/org/dataone A src/test/resources/org/dataone/configuration A src/test/resources/org/dataone/configuration/config.xml A src/test/resources/org/dataone/configuration/test-ldap.properties A src/test/resources/org/dataone/configuration/test-jdbc.properties A src/test/resources/commons-logging.properties A src/test/resources/log4j.properties A src/test/java A src/test/java/org A src/test/java/org/dataone A src/test/java/org/dataone/cn A src/test/java/org/dataone/cn/hazelcast A src/test/java/org/dataone/cn/ldap A src/test/java/org/dataone/cn/ldap/DirContextProviderTestUnit.java A src/test/java/org/dataone/cn/ldap/LdapServiceTestUnit.java A src/test/java/org/dataone/cn/ldap/DirContextPooledObjectFactoryTestUnit.java A src/test/java/org/dataone/cn/ldap/LDAPServiceSuiteTest.java A src/test/java/org/dataone/cn/ldap/MockLDAPService.java A src/test/java/org/dataone/cn/log A src/test/java/org/dataone/cn/log/MetricLogEntryTest.java A src/test/java/org/dataone/cn/dao A src/test/java/org/dataone/cn/dao/ReplicationDaoMetacatImplTest.java A src/test/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImplTestUtil.java A src/test/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImplTest.java A src/test/java/org/dataone/cn/dao/ReplicationDaoMetacatImplTestUtil.java A src/test/java/org/dataone/cn/servlet A src/test/java/org/dataone/cn/servlet/http A src/test/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapperTestCase.java A src/main A src/main/resources A src/main/resources/buildInfo A src/main/resources/buildInfo/buildInfo.properties A src/main/java A src/main/java/org A src/main/java/org/dataone A src/main/java/org/dataone/cn A src/main/java/org/dataone/cn/hazelcast A src/main/java/org/dataone/cn/hazelcast/HazelcastInstanceFactory.java A src/main/java/org/dataone/cn/hazelcast/membership A src/main/java/org/dataone/cn/hazelcast/membership/ClusterPartitionMonitor.java A src/main/java/org/dataone/cn/hazelcast/membership/BaseHazelcastMembershipListener.java A src/main/java/org/dataone/cn/hazelcast/membership/ClusterPartitionMembershipListener.java A src/main/java/org/dataone/cn/hazelcast/HazelcastClientInstance.java A src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java A src/main/java/org/dataone/cn/hazelcast/HazelcastConfigLocationFactory.java A src/main/java/org/dataone/cn/hazelcast/ClientConfiguration.java A src/main/java/org/dataone/cn/ldap A src/main/java/org/dataone/cn/ldap/DirContextPooledObjectFactory.java A src/main/java/org/dataone/cn/ldap/DirContextProvider.java A src/main/java/org/dataone/cn/ldap/LDAPService.java A src/main/java/org/dataone/cn/ldap/DirContextUnsolicitedNotificationListener.java A src/main/java/org/dataone/cn/ldap/D1UnsolicitedNotificationListener.java A src/main/java/org/dataone/cn/model A src/main/java/org/dataone/cn/model/repository A src/main/java/org/dataone/cn/model/repository/PostgresRepositoryConfiguration.java A src/main/java/org/dataone/cn/model/repository/H2RepositoryConfiguration.java A src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java A src/main/java/org/dataone/cn/batch A src/main/java/org/dataone/cn/batch/exceptions A src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java A src/main/java/org/dataone/cn/log A src/main/java/org/dataone/cn/log/MetricEvent.java A src/main/java/org/dataone/cn/log/AuditLogClientSplunkImpl.java A src/main/java/org/dataone/cn/log/MetricLogClientLog4JImpl.java A src/main/java/org/dataone/cn/log/AuditLogClient.java A src/main/java/org/dataone/cn/log/MetricLogEntry.java A src/main/java/org/dataone/cn/log/AuditEvent.java A src/main/java/org/dataone/cn/log/AuditLogClientSolrImpl.java A src/main/java/org/dataone/cn/log/AuditLogEntry.java A src/main/java/org/dataone/cn/log/MetricLogClientFactory.java A src/main/java/org/dataone/cn/log/AuditLogQueryClient.java A src/main/java/org/dataone/cn/log/AuditLogClientFactory.java A src/main/java/org/dataone/cn/log/AuditLogQueryClientNullObjectImpl.java A src/main/java/org/dataone/cn/log/AuditLogWriteClientSplunkImpl.java A src/main/java/org/dataone/cn/log/AuditLogWriteClient.java A src/main/java/org/dataone/cn/log/MetricLogClient.java A src/main/java/org/dataone/cn/synchronization A src/main/java/org/dataone/cn/synchronization/types A src/main/java/org/dataone/cn/synchronization/types/SyncObject.java A src/main/java/org/dataone/cn/dao A src/main/java/org/dataone/cn/dao/ReplicationDaoMetacatImpl.java A src/main/java/org/dataone/cn/dao/MetacatDataSourceFactory.java A src/main/java/org/dataone/cn/dao/exceptions A src/main/java/org/dataone/cn/dao/exceptions/DataAccessException.java A src/main/java/org/dataone/cn/dao/SystemMetadataDao.java A src/main/java/org/dataone/cn/dao/SystemMetadataStatus.java A src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java A src/main/java/org/dataone/cn/dao/DaoFactory.java A src/main/java/org/dataone/cn/dao/ReplicationPolicyEntry.java A src/main/java/org/dataone/cn/dao/ReplicationDao.java A src/main/java/org/dataone/cn/servlet A src/main/java/org/dataone/cn/servlet/http A src/main/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapper.java A src/main/java/org/dataone/cn/servlet/http/BufferedServletOutputStream.java A src/main/java/org/dataone/cn/servlet/http/BufferedServletResponseWrapper.java A src/main/java/org/dataone/cn/servlet/http/ParameterKeys.java A src/main/java/org/dataone/cn/ComponentActivationUtility.java U . At revision 19315 Parsing POMs Modules changed, recalculating dependency graph Established TCP socket on 49341 [d1_cn_common] $ java -cp /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.12-alpha-1.jar:/usr/share/maven/boot/plexus-classworlds-2.x.jar org.jvnet.hudson.maven3.agent.Maven3Main /usr/share/maven /var/cache/jenkins/war/WEB-INF/lib/remoting-3.20.jar /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.12-alpha-1.jar /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.12-alpha-1.jar 49341 <===[JENKINS REMOTING CAPACITY]===>channel started Executing Maven: -B -f /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml clean install javadoc:javadoc [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for org.dataone:d1_cn_common:jar:2.4.0-SNAPSHOT [WARNING] 'build.plugins.plugin.version' for com.mycila.maven-license-plugin:maven-license-plugin is missing. @ line 268, column 21 [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-compiler-plugin is missing. @ line 222, column 21 [WARNING] 'build.plugins.plugin.version' for org.codehaus.mojo:buildnumber-maven-plugin is missing. @ line 230, column 21 [WARNING] 'build.plugins.plugin.version' for org.apache.felix:maven-bundle-plugin is missing. @ line 275, column 21 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building DataONE_Cn_Common 2.4.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.3:clean (default-clean) @ d1_cn_common --- [INFO] [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ d1_cn_common --- [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildNumber: 19315 at timestamp: 1536254262279 [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildScmBranch: trunk [INFO] [INFO] --- maven-resources-plugin:2.3:resources (default-resources) @ d1_cn_common --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 1 resource [INFO] [INFO] --- maven-compiler-plugin:2.0.2:compile (default-compile) @ d1_cn_common --- [INFO] Compiling 47 source files to /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/classes [INFO] [INFO] --- maven-resources-plugin:2.3:testResources (default-testResources) @ d1_cn_common --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 5 resources [INFO] [INFO] --- maven-compiler-plugin:2.0.2:testCompile (default-testCompile) @ d1_cn_common --- [INFO] Compiling 11 source files to /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes [INFO] [INFO] --- maven-surefire-plugin:2.10:test (default-test) @ d1_cn_common --- [INFO] Surefire report directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/surefire-reports ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase 20180906-17:17:44: [INFO]: proxy.request RequestURL: http://localhost/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request QueryString: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request toString:org.springframework.mock.web.MockHttpServletRequest@64bfbc86 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.request.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper RequestURL: http://localhost/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper QueryString: fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper toString: org.dataone.cn.servlet.http.ProxyServletRequestWrapper@64bf3bbf [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: proxy.wrapper.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20180906-17:17:44: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.104 sec Running org.dataone.cn.ldap.LDAPServiceSuiteTest 20180906-17:17:45: [WARN]: ApacheDS shutdown hook has NOT been registered with the runtime. This default setting for standalone operation has been overriden. [org.apache.directory.server.core.DefaultDirectoryService] 20180906-17:17:47: [WARN]: You didn't change the admin password of directory service instance 'org'. Please update the admin password as soon as possible to prevent a possible security breach. [org.apache.directory.server.core.DefaultDirectoryService] 20180906-17:17:49: [DEBUG]: Using partition factory JdbmPartitionFactory [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner] 20180906-17:17:49: [DEBUG]: ClassLoader type: AppClassLoader [org.dataone.configuration.Settings] 20180906-17:17:49: [DEBUG]: TestSettings not found: assume production context [org.dataone.configuration.Settings] 20180906-17:17:49: [DEBUG]: Loading configuration: file:/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/config.xml [org.dataone.configuration.Settings] 20180906-17:17:49: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder] 20180906-17:17:49: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration] 20180906-17:17:49: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0.0 [org.apache.commons.beanutils.converters.BigDecimalConverter] 20180906-17:17:49: [DEBUG]: Converting 'BigDecimal' value '0.0' to type 'BigDecimal' [org.apache.commons.beanutils.converters.BigDecimalConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a BigDecimal [org.apache.commons.beanutils.converters.BigDecimalConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.BigIntegerConverter] 20180906-17:17:49: [DEBUG]: Converting 'BigInteger' value '0' to type 'BigInteger' [org.apache.commons.beanutils.converters.BigIntegerConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a BigInteger [org.apache.commons.beanutils.converters.BigIntegerConverter] 20180906-17:17:49: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter] 20180906-17:17:49: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.StringConverter] 20180906-17:17:49: [DEBUG]: Converting 'String' value '' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Z@10c07b8d [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'boolean[]' value '[Z@10c07b8d' to type 'boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a boolean[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [B@720bf653 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'byte[]' value '[B@720bf653' to type 'byte[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a byte[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [C@360bc645 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'char[]' value '[C@360bc645' to type 'char[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a char[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [D@4edef76c [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'double[]' value '[D@4edef76c' to type 'double[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a double[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [F@5d51e129 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'float[]' value '[F@5d51e129' to type 'float[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a float[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [I@70c53dbe [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'int[]' value '[I@70c53dbe' to type 'int[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a int[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [J@1894e40d [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'long[]' value '[J@1894e40d' to type 'long[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a long[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [S@21c815e4 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'short[]' value '[S@21c815e4' to type 'short[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a short[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.math.BigDecimal;@7342e05d [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@7342e05d' to type 'BigDecimal[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a BigDecimal[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.math.BigInteger;@15383681 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@15383681' to type 'BigInteger[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a BigInteger[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Boolean;@109a2025 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Boolean[]' value '[Ljava.lang.Boolean;@109a2025' to type 'Boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Boolean[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Byte;@761956ac [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Byte[]' value '[Ljava.lang.Byte;@761956ac' to type 'Byte[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Byte[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Character;@304d0259 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Character[]' value '[Ljava.lang.Character;@304d0259' to type 'Character[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Character[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Double;@2133661d [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Double[]' value '[Ljava.lang.Double;@2133661d' to type 'Double[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Double[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Float;@3414a8c3 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Float[]' value '[Ljava.lang.Float;@3414a8c3' to type 'Float[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Float[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Integer;@cf518cf [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Integer[]' value '[Ljava.lang.Integer;@cf518cf' to type 'Integer[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Integer[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Long;@68d651f2 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Long[]' value '[Ljava.lang.Long;@68d651f2' to type 'Long[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Long[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Short;@1e43e323 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Short[]' value '[Ljava.lang.Short;@1e43e323' to type 'Short[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Short[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.String;@10643593 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'String[]' value '[Ljava.lang.String;@10643593' to type 'String[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a String[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.lang.Class;@eca6a74 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Class[]' value '[Ljava.lang.Class;@eca6a74' to type 'Class[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Class[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.util.Date;@79fd6f95 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Date[]' value '[Ljava.util.Date;@79fd6f95' to type 'Date[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Date[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.util.Calendar;@49c675f0 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'Calendar[]' value '[Ljava.util.Calendar;@49c675f0' to type 'Calendar[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a Calendar[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.io.File;@6917bb4 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'java.io.File[]' value '[Ljava.io.File;@6917bb4' to type 'java.io.File[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a java.io.File[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.sql.Date;@1442f788 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@1442f788' to type 'java.sql.Date[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a java.sql.Date[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.sql.Time;@1c7f96b1 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@1c7f96b1' to type 'java.sql.Time[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a java.sql.Time[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.sql.Timestamp;@7a04fea7 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@7a04fea7' to type 'java.sql.Timestamp[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a java.sql.Timestamp[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Setting default value: [Ljava.net.URL;@7b6e5c12 [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Converting 'java.net.URL[]' value '[Ljava.net.URL;@7b6e5c12' to type 'java.net.URL[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: No conversion required, value is already a java.net.URL[] [org.apache.commons.beanutils.converters.ArrayConverter] 20180906-17:17:49: [DEBUG]: Convert string 'test-jdbc.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils] 20180906-17:17:49: [DEBUG]: Converting 'String' value 'test-jdbc.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20180906-17:17:49: [DEBUG]: FileName set to test-jdbc.properties [org.apache.commons.configuration.PropertiesConfiguration] 20180906-17:17:49: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-jdbc.properties [org.apache.commons.configuration.ConfigurationUtils] 20180906-17:17:49: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder] 20180906-17:17:49: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration] 20180906-17:17:49: [DEBUG]: Convert string 'test-ldap.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils] 20180906-17:17:49: [DEBUG]: Converting 'String' value 'test-ldap.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20180906-17:17:49: [DEBUG]: FileName set to test-ldap.properties [org.apache.commons.configuration.PropertiesConfiguration] 20180906-17:17:49: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-ldap.properties [org.apache.commons.configuration.ConfigurationUtils] 20180906-17:17:49: [DEBUG]: Loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_common_java/2.4.0-SNAPSHOT/d1_common_java-2.4.0-SNAPSHOT.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings] 20180906-17:17:49: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:49: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:49: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:49: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:49: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:49: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:50: [INFO]: Pooled Object Create Date = 2018-17-06 05:17:49.049 Current Time 2018-17-06 05:17:50.050 pooled object idle MS 1000 [org.dataone.cn.ldap.DirContextPooledObjectFactoryTestUnit] 20180906-17:17:50: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:50: [DEBUG]: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: added dirContext #0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: After Adding: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:50: [DEBUG]: added dirContext #1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:50: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: added dirContext #2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: added dirContext #3 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:51: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: added dirContext #4 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Returning: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20180906-17:17:52: [DEBUG]: After Returning: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20180906-17:17:52: [DEBUG]: Added entry DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Added entry C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Added entry O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Added entry OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Removed entry: OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Found matching attribute: d1NodeApproved=* [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Attribute value: TRUE [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [DEBUG]: Found matching attribute: d1NodeApproved=TRUE [org.dataone.cn.ldap.LDAPService] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [DEBUG]: Shuting down DS for org [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20180906-17:17:52: [ERROR]: javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org' [org.dataone.cn.ldap.DirContextPooledObjectFactory] javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org' at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:2002) at com.sun.jndi.ldap.LdapCtx.doSearchOnce(LdapCtx.java:1933) at com.sun.jndi.ldap.LdapCtx.c_getAttributes(LdapCtx.java:1325) at com.sun.jndi.toolkit.ctx.ComponentDirContext.p_getAttributes(ComponentDirContext.java:235) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:141) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:129) at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:142) at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:137) at org.dataone.cn.ldap.DirContextPooledObjectFactory.validateObject(DirContextPooledObjectFactory.java:147) at org.apache.commons.pool2.impl.GenericObjectPool.evict(GenericObjectPool.java:806) at org.apache.commons.pool2.impl.BaseGenericObjectPool$Evictor.run(BaseGenericObjectPool.java:1036) at java.util.TimerThread.mainLoop(Timer.java:555) at java.util.TimerThread.run(Timer.java:505) Caused by: java.io.IOException: connection closed at com.sun.jndi.ldap.LdapClient.ensureOpen(LdapClient.java:1592) at com.sun.jndi.ldap.LdapClient.search(LdapClient.java:530) at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:1985) ... 12 more 20180906-17:17:52: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.942 sec Running org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest 20180906-17:17:52: [DEBUG]: Metacat Data Source JDBC settings: [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: metacat.datasource.url:jdbc:h2:mem:db1 [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: metacat.datasource.driverClass:org.h2.Driver [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: database.user:metacat [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: database.password:metacat [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: metacat.datasource.initialSize:3 [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: metacat.datasource.maxSize:15 [org.dataone.cn.dao.MetacatDataSourceFactory] 20180906-17:17:52: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:52: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: sysMetaStatusList statement is: prep3: SELECT guid, serial_version, date_modified, archived FROM systemmetadata ORDER BY guid; [org.dataone.cn.dao.SystemMetadataDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO identifier VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', '6f632bd1cc2772bdcc43bafdbb9d8669.1', 1);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', 'urn:node:testSource', 'urn:node:testSource', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, 1, '6f632bd1cc2772bdcc43bafdbb9d8669.1.0', '6f632bd1cc2772bdcc43bafdbb9d8669.1.2');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'public', 4, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'testSubject', 7, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode2', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode4', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode3', 'blocked');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode2','COMPLETED','2013-08-05 16:40:00.000');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode4','QUEUED','2013-08-05 16:25:00.000');] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testGetSystemMetadata(SystemMetadataDaoMetacatImplTest.java:90) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.saveSystemMetadata(SystemMetadataDaoMetacatImpl.java:365) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:180) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 4 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 3 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 2 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:711) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:761) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:184) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) at org.junit.runners.ParentRunner.run(ParentRunner.java:236) at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110) at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175) at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 43 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 46 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 50 more 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.732 sec Running org.dataone.cn.dao.ReplicationDaoMetacatImplTest 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Getting current pending replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getPendingReplicasbyNode statement is: prep253: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'REQUESTED' OR status = 'QUEUED' GROUP BY member_node ORDER BY member_node; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Pending replicas by node result size is 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Pending replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Node: mn:test:2, count: 1 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Node: mn:test:1, count: 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Getting recently failed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Calendar date is: 2018-09-06 17:17:53 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Cutoff date is: 2018-09-06 16:17:53.668 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: getRecentFailedReplicas statement is: prep254: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'FAILED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2018-09-06 16:17:53.668'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Failed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Recent failed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getCompletedMemberNodeReplicas statement is: prep255: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node <> 'cnDev' ORDER BY date_verified ASC ; {1: TIMESTAMP '2018-09-06 17:17:53.672'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getCompletedCoordinatingNodeReplicas statement is: prep256: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node = 'cnDev' ORDER BY date_verified ASC; {1: TIMESTAMP '2018-09-06 17:17:53.677'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Getting recently completed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Calendar date is: 2018-09-06 17:17:53 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Cutoff date is: 2018-09-06 16:17:53.681 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: getRecentCompletedReplicas statement is: prep257: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'COMPLETED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2018-09-06 16:17:53.681'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Recent completed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Recent completed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Getting current entry counts by node status. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getCountsByNodeStatus statement is: prep258: SELECT member_node, status, count(status) AS count FROM smreplicationstatus GROUP BY member_node, status ORDER BY member_node, status; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Counts by node-status result size is 3 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getRequestedReplicasByDate statement is: prep259: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'REQUESTED' ORDER BY date_verified ASC; {1: TIMESTAMP '2018-09-06 17:17:53.688'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getRequestedReplicasByDate statement is: prep260: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'REQUESTED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getMemberNodesWithQueuedReplica statement is: prep261: SELECT DISTINCT member_node FROM smreplicationstatus WHERE status='QUEUED'; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicaCountByNode statement is: prep262: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:33'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicaCountByNode statement is: prep263: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicaCountByNode statement is: prep264: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicaCountByNode statement is: prep265: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicaCountByNode statement is: prep266: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep267: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep268: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep269: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep270: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep271: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'nosuch', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep272: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid3', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: getQueuedReplicasByDate statement is: prep273: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid4', 2: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20180906-17:17:53: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20180906-17:17:53: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.072 sec Running org.dataone.cn.log.MetricLogEntryTest {"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2018-09-06T17:17:53.730+00:00"} 20180906-17:17:53: [INFO]: {"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2018-09-06T17:17:53.730+00:00"} [org.dataone.cn.log.MetricLogEntryTest] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 sec Results : Tests run: 36, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.SurefireArchiver$2; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.BuildInfoRecorder$1; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [INFO] [INFO] --- maven-jar-plugin:2.2:jar (default-jar) @ d1_cn_common --- [INFO] Building jar: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar [INFO] [INFO] --- maven-jar-plugin:2.2:test-jar (default) @ d1_cn_common --- [INFO] Building jar: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar [INFO] [INFO] --- maven-install-plugin:2.3:install (default-install) @ d1_cn_common --- [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.jar [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.pom [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT-tests.jar [INFO] [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ d1_cn_common --- [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildNumber: 19315 at timestamp: 1536254275705 [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildScmBranch: trunk [WARNING] Failed to getClass for org.apache.maven.plugin.javadoc.JavadocReport [INFO] [INFO] --- maven-javadoc-plugin:2.10.4:javadoc (default-cli) @ d1_cn_common --- [INFO] Loading source files for package org.dataone.cn.batch.exceptions... 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Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/synchronization/types/package-use.html... Building index for all the packages and classes... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/overview-tree.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/index-all.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/deprecated-list.html... Building index for all classes... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/allclasses-frame.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/allclasses-noframe.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/index.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/overview-summary.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/help-doc.html... 30 warnings [WARNING] Javadoc Warnings [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java:34: warning - @param argument "cause" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java:41: warning - @param argument "cause" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java:103: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java:130: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastInstanceFactory.java:44: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @Configuration is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @EnableJpaRepositories("repository is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @ComponentScan("model is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "58" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:367: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see: reference not found: http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:247: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:277: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:307: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/ReplicationDao.java:89: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:41: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:50: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:65: warning - @param argument "tableMap" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:348: warning - Tag @see: can't find saveSystemMetadata(org.dataone.service.types.v1.SystemMetadata) in org.dataone.cn.dao.SystemMetadataDao [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:410: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:640: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:754: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:787: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:815: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:1352: warning - @return tag has no arguments. [JENKINS] Archiving javadoc [WARNING] Attempt to (de-)serialize anonymous class hudson.FilePath$32; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.MavenArtifactArchiver$2; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.MavenFingerprinter$1; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ Notifying upstream projects of job completion Join notifier requires a CauseAction [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ [INFO] Total time: 17.408s [INFO] Finished at: Thu Sep 06 17:17:57 UTC 2018 [INFO] Final Memory: 54M/486M [INFO] ------------------------------------------------------------------------ Waiting for Jenkins to finish collecting data [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.pom [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.jar [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT-tests.jar channel stopped Maven RedeployPublisher use remote maven settings from : /usr/share/maven/conf/settings.xml [ERROR] uniqueVersion == false is not anymore supported in maven 3 [INFO] Deployment in file:///var/www/maven (id=,uniqueVersion=false) Deploying the main artifact d1_cn_common-2.4.0-SNAPSHOT.jar Downloading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Downloaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (985 B at 961.9 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10.jar Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10.jar (119 KB at 118585.0 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10.pom Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10.pom (12 KB) Downloading: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml Downloaded: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml (2 KB) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (988 B) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml (2 KB) Deploying the main artifact d1_cn_common-2.4.0-SNAPSHOT-tests.jar Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10-tests.jar Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20180906.171759-10-tests.jar (36 KB at 35834.0 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (989 B) [INFO] Deployment done in 45 ms Notifying upstream projects of job completion Not triggering d1_cn_index_tool because it has dependencies in the downstream project list Not triggering d1_cn_service because it has dependencies in the downstream project list Not triggering d1_replication_auditor because it has dependencies in the downstream project list Not triggering d1_solr_extensions because it has dependencies in the downstream project list Not triggering d1_synchronization because it has dependencies in the downstream project list Not triggering d1_cn_index_processor because it has dependencies in the downstream project list Not triggering d1_replication because it has dependencies in the downstream project list Not triggering d1_cn_index_generator because it has dependencies in the downstream project list Not triggering d1_cn_noderegistry because it has dependencies in the downstream project list Finished: SUCCESS